MolNFT v1 · #9478 · protein

Ompf porin mutant nqaaa

1HXT · Outer membrane protein F: “Ompf porin mutant nqaaa”. X-ray diffraction, 2 pockets (best druggability 0.69). MolNFT v1 #9478 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1HXT
Type: protein
Length: 340 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Outer membrane protein F
UniProt: P02931
Pockets: 2 · best druggability 0.69

Structure

x-ray diffraction · 1 distinct chain · 4% helix, 60% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Outer membrane protein F	protein	340	4% helix, 60% strand	P02931

Ligands and binding sites

C8E · (hydroxyethyloxy)tri(ethyloxy)octane · additive · 10 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	939	0.69	0.74	67	empty
2	275	0.50	0.74	37	empty

Compared structures

1HXT · Ompf porin mutant nqaaa · the same entry in another collection · chain A against A, TM-score 1.00
P02931 · AlphaFold monomer V2.0 prediction for outer membrane porin F (P02931) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P02931
Elsewhere: RCSB PDB 1HXT · PDBe 1HXT · UniProt P02931

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