MolNFT v1 · #94664 · protein

Crystal structure of serine hydrolase CCSP0084 from the polyaromatic hydrocarbon (pah)-degrading bacterium cycloclasticus zankles

4I3F: “Crystal structure of serine hydrolase CCSP0084 from the polyaromatic hydrocarbon (pah)-degrading bacterium…”. X-ray diffraction, 2 ligands (NA, CL), 1 pocket (best druggability 0.54). MolNFT v1 #94664 on GenesisL1: 3D structure…

PDB: 4I3F
Type: protein
Length: 283 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Serine hydrolase CCSP0084
Ligands: NA, CL
Pockets: 1 · best druggability 0.54

Structure

x-ray diffraction · 1 distinct chain · 46% helix, 18% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Serine hydrolase CCSP0084	protein	283	46% helix, 18% strand	—

Ligands and binding sites

NA · Sodium ion · metal · chains A
CL · Chloride ion · ion · 2 copies · chains A
PEG · Di(hydroxyethyl)ether · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	93	0.54	0.85	27	CL

Compared structures

4I3F · Crystal structure of serine hydrolase CCSP0084 from the polyaromatic hydrocarbon… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 4I3F · PDBe 4I3F

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.