MolNFT v1 · #94505 · protein

Crystal structure of phospholipase A1 from streptomyces albidoflavus NA297

4HYQ: “Crystal structure of phospholipase A1 from streptomyces albidoflavus NA297”. X-ray diffraction, 1 pocket (best druggability 0.65). MolNFT v1 #94505 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4HYQ
Type: protein
Length: 236 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Phospholipase A1
EC: 3.1.1.32
Pockets: 1 · best druggability 0.65

Structure

x-ray diffraction · 1 distinct chain · 47% helix, 12% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Phospholipase A1 (EC 3.1.1.32)	protein	236	47% helix, 12% strand	—

Ligands and binding sites

1PE · Pentaethylene glycol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	217	0.65	0.83	30	1PE

Modifications

Observed in the structure: 3 disulfide (disulfide).

Compared structures

4HYQ · Crystal structure of phospholipase A1 from Streptomyces albidoflavus NA297 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 4HYQ · PDBe 4HYQ

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