MolNFT v1 · #93940 · protein

Crystal structure of the pseudomonas aeruginosa azurin, H124NO YOH122

4HHW: “Crystal structure of the pseudomonas aeruginosa azurin, H124NO YOH122”. X-ray diffraction, 1 ligand (CU), 1 pocket (best druggability 0.33). MolNFT v1 #93940 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4HHW
Type: protein
Length: 256 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Azurin
UniProt: P00282
Ligands: CU
Pockets: 1 · best druggability 0.33

Structure

x-ray diffraction · 1 distinct chain · 21% helix, 34% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Azurin	protein	128	21% helix, 34% strand	P00282

Ligands and binding sites

CU · Copper (II) ion · metal · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	80	0.33	0.75	17	empty

Interfaces

1 interface between chains.

A–B · 498 Å² buried · 19 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 disulfide, 2 modified (disulfide, nonstandard).

Compared structures

4HHW · Crystal structure of the Pseudomonas aeruginosa azurin, H124NO YOH122 · the same entry in another collection · chain A against A, TM-score 1.00
P00282 · AlphaFold monomer V2.0 prediction for azurin (P00282) · a predicted model of the same protein · chain B against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P00282
Elsewhere: RCSB PDB 4HHW · PDBe 4HHW · UniProt P00282

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