MolNFT v1 · #93278 · protein

Crystal structure of staphylococcus aureus protein sarz mutant C13E

4GXO · Marr family regulatory protein: “Crystal structure of staphylococcus aureus protein sarz mutant C13E”. X-ray diffraction, 3 pockets (best druggability 0.57). MolNFT v1 #93278 on GenesisL1: 3D structure, binding sites and pockets in…

PDB: 4GXO
Type: protein
Length: 276 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Marr family regulatory protein
UniProt: A6QJM6
Pockets: 3 · best druggability 0.57

Structure

x-ray diffraction · 2 distinct chains · 64% helix, 11% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Marr family regulatory protein	protein	139	63% helix, 12% strand	A6QJM6
B	Marr family regulatory protein	protein	137	66% helix, 9% strand	A6QJM6

Ligands and binding sites

GOL · Glycerol · additive · 3 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	337	0.57	0.75	38	empty
2	109	0.43	0.77	13	empty
3	112	0.43	0.76	13	GOL

Interfaces

1 interface between chains.

A–B · 2592 Å² buried · 28 hydrogen bonds · protein-protein

Compared structures

4GXO · Crystal structure of Staphylococcus aureus protein SarZ mutant C13E · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A6QJM6
Elsewhere: RCSB PDB 4GXO · PDBe 4GXO · UniProt A6QJM6

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