MolNFT v1 · #9319 · protein

The structure of the hmg box and its interaction with DNA

1HSM · High mobility group protein 1: “The structure of the hmg box and its interaction with DNA”. Solution nmr. MolNFT v1 #9319 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1HSM
Type: protein
Length: 79 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: High mobility group protein 1
UniProt: P07156

Structure

solution nmr · 1 distinct chain · 62% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	High mobility group protein 1	protein	79	62% helix, 0% strand	P07156

Ligands and binding sites

BME · Beta-mercaptoethanol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 1 covalent (additive adduct).

Compared structures

1HSM · The structure of the hmg box and its interaction with DNA · the same entry in another collection · chain A against A, TM-score 1.00
P07156 · AlphaFold monomer V2.0 prediction for high mobility group protein B1 (P07156) · a predicted model of the same protein · chain A against A, TM-score 0.82

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P07156
Elsewhere: RCSB PDB 1HSM · PDBe 1HSM · UniProt P07156

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