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MolNFT v1 · #92747 · protein

Crystal structure of greglin in complex with subtilisin

4GI3 · Kera: “Crystal structure of greglin in complex with subtilisin”. X-ray diffraction, 2 pockets (best druggability 0.59). MolNFT v1 #92747 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
4GI3
Type
protein
Length
331 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Kera; Greglin
UniProt
Q9FDF2, P85064
Pockets
2 · best druggability 0.59

Structure

x-ray diffraction · 2 distinct chains · 29% helix, 22% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AKeraprotein27430% helix, 22% strandQ9FDF2
CGreglinprotein5725% helix, 26% strandP85064

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11670.590.8238empty
2650.300.7415empty

Interfaces

1 interface between chains.

  • A–C · 782 Ų buried · 14 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 4 disulfide (disulfide).

Compared structures

  • 4GI3 · Crystal structure of Greglin in complex with subtilisin · the same entry in another collection · chain A against A, TM-score 1.00
  • P85064 · AlphaFold monomer V2.0 prediction for greglin (P85064) · a predicted model of the same protein · chain C against A, TM-score 0.96

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