MolNFT v1 · #92450 · protein
Crystal structure of CLONE42 TCR
4G8F · Alpha chain clone 42 TCR: “Crystal structure of CLONE42 TCR”. X-ray diffraction, 3 pockets (best druggability 0.73). MolNFT v1 #92450 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4G8F
- Type
- protein
- Length
- 427 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Alpha chain clone 42 TCR; Beta chain clone 42 TCR
- Pockets
- 3 · best druggability 0.73
Structure
x-ray diffraction · 2 distinct chains · 5% helix, 48% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alpha chain clone 42 TCR | protein | 184 | 2% helix, 47% strand | — |
| B | Beta chain clone 42 TCR | protein | 243 | 7% helix, 49% strand | — |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1043 | 0.73 | 0.76 | 91 | empty |
| 2 | 136 | 0.46 | 0.77 | 25 | empty |
| 3 | 55 | 0.26 | 0.73 | 15 | empty |
Interfaces
1 interface between chains.
- A–B · 2150 Ų buried · 23 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 3 disulfide (disulfide).
Compared structures
- 4G8F · Crystal Structure of clone42 TCR · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 4G8F · PDBe 4G8F
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