MolNFT v1 · #92355 · protein
Crystal structure of a periplasmic domain of the epsab fusion protein of the vibrio vulnificus type II secretion system
4G54 · General secretion pathway protein: “Crystal structure of a periplasmic domain of the epsab fusion protein of the vibrio vulnificus type II…”. X-ray diffraction, 3 pockets (best druggability 0.36). MolNFT v1 #92355 on GenesisL1: 3D…
- PDB
- 4G54
- Type
- protein
- Length
- 222 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- General secretion pathway protein
- Pockets
- 3 · best druggability 0.36
Structure
x-ray diffraction · 1 distinct chain · 32% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | General secretion pathway protein | protein | 222 | 32% helix, 24% strand | — |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 62 | 0.36 | 0.78 | 19 | empty |
| 2 | 59 | 0.35 | 0.78 | 16 | empty |
| 3 | 58 | 0.26 | 0.73 | 13 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 4G54 · Crystal structure of a periplasmic domain of the EpsAB fusion protein of the Vibrio… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 4G54 · PDBe 4G54
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