MolNFT v1 · #92316 · protein

Mycobacterium smegmatis DPRE1 - hexagonal crystal form

4G3T · Oxidoreductase DPRE1: “Mycobacterium smegmatis DPRE1 - hexagonal crystal form”. X-ray diffraction, 1 pocket (best druggability 0.70). MolNFT v1 #92316 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4G3T
Type: protein
Length: 336 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Oxidoreductase DPRE1
EC: 1.-.-.-
UniProt: A0R607
Pockets: 1 · best druggability 0.70

Structure

x-ray diffraction · 1 distinct chain · 32% helix, 26% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Oxidoreductase DPRE1 (EC 1.-.-.-)	protein	336	32% helix, 26% strand	A0R607

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	566	0.70	0.79	66	empty

Compared structures

4G3T · Mycobacterium smegmatis DprE1 - hexagonal crystal form · the same entry in another collection · chain A against A, TM-score 1.00
A0R607 · AlphaFold monomer V2.0 prediction for decaprenylphosphoryl-beta-D- ribose oxidase (A0R607) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0R607
Elsewhere: RCSB PDB 4G3T · PDBe 4G3T · UniProt A0R607

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