GL1X · GenesisL1 explorer

MolNFT v1 · #91969 · protein

Crystal structure of the CHK1

4FT3 · SERINE/THREONINE-protein kinase CHK1: “Crystal structure of the CHK1”. X-ray diffraction, 2 ligands (H1K, SO4), 1 pocket (best druggability 0.64). MolNFT v1 #91969 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
4FT3
Type
protein
Length
271 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
SERINE/THREONINE-protein kinase CHK1
EC
2.7.11.1
UniProt
O14757
Ligands
H1K, SO4
Pockets
1 · best druggability 0.64

Structure

x-ray diffraction · 1 distinct chain · 31% helix, 22% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ASERINE/THREONINE-protein kinase CHK1 (EC 2.7.11.1)protein27131% helix, 22% strandO14757

Ligands and binding sites

  • H1K · 1-(5-chloro-2,4-dimethoxyphenyl)-3-pyrazin-2-ylurea · ligand · chains A
  • SO4 · Sulfate ion · ion · chains A
  • IPA · Isopropyl alcohol · additive · 4 copies · chains A
  • GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
12700.640.8138H1K

Modifications

Observed in the structure: 2 modified (oxidation).

Compared structures

  • 4FT3 · Crystal Structure of the CHK1 · the same entry in another collection · chain A against A, TM-score 1.00
  • 2C3L · Identification of a buried pocket for potent and selective inhibition of CHK1: prediction… · a predicted model of the same protein · chain A against A, TM-score 0.97
  • 2C3K · Identification of a buried pocket for potent and selective inhibition of CHK1: prediction… · a predicted model of the same protein · chain A against A, TM-score 0.95
  • O14757 · AlphaFold monomer V2.0 prediction for SERINE/THREONINE-protein kinase CHK1 (O14757) · a predicted model of the same protein · chain A against A, TM-score 0.94
  • 2C3J · Identification of a buried pocket for potent and selective inhibition of CHK1: prediction… · a predicted model of the same protein · chain A against A, TM-score 0.93

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