MolNFT v1 · #91839 · DNA
DNA octamer D(GTGGCCAC) with 2'-se modification
4FP6 · DNA (5'-D(*GP*(2ST)P*GP*GP*CP*CP*AP*C)-3'): “DNA octamer D(GTGGCCAC) with 2'-se modification”. X-ray diffraction, 1 ligand (CL). MolNFT v1 #91839 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4FP6
- Type
- DNA
- Length
- 8 nucleotides
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'-D(*GP*(2ST)P*GP*GP*CP*CP*AP*C)-3')
- Ligands
- CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA (5'-D(*GP*(2ST)P*GP*GP*CP*CP*AP*C)-3') | dna | 8 | — | — |
Ligands and binding sites
- CL · Chloride ion · ion
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 modified (nucleotide modification).
Compared structures
- 4FP6 · DNA octamer d(gtggccac) with 2'-se modification · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 4FP6 · PDBe 4FP6
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.