MolNFT v1 · #91239 · protein
Crystal structure of a susd homolog (BVU_2203) from bacteroides vulgatus atcc 8482 at 1.85 a resolution
4F7A · Putative uncharacterized protein: “Crystal structure of a susd homolog (BVU_2203) from bacteroides vulgatus atcc 8482 at 1.85 a resolution”. X-ray diffraction, 1 ligand (NA), 4 pockets (best druggability 0.40). MolNFT v1 #91239 on…
- PDB
- 4F7A
- Type
- protein
- Length
- 498 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative uncharacterized protein
- UniProt
- A6L2F0
- Ligands
- NA
- Pockets
- 4 · best druggability 0.40
Structure
x-ray diffraction · 1 distinct chain · 49% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative uncharacterized protein | protein | 498 | 49% helix, 4% strand | A6L2F0 |
Ligands and binding sites
- NA · Sodium ion · metal · chains A
- GOL · Glycerol · additive · 2 copies · chains A
- PGE · Triethylene glycol · additive · chains A
- ACT · Acetate ion · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 100 | 0.40 | 0.76 | 17 | empty |
| 2 | 57 | 0.37 | 0.79 | 15 | empty |
| 3 | 85 | 0.36 | 0.76 | 21 | empty |
| 4 | 59 | 0.28 | 0.74 | 18 | GOL |
Modifications
Observed in the structure: 8 modified (engineered).
Compared structures
- 4F7A · Crystal structure of a susd homolog (BVU_2203) from Bacteroides vulgatus ATCC 8482 at… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A6L2F0
- Elsewhere: RCSB PDB 4F7A · PDBe 4F7A · UniProt A6L2F0
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