MolNFT v1 · #91116 · protein

Structure of a yebc family protein (CBU_1566) from coxiella burnetii

4F3Q · Transcriptional regulatory protein CBU_1566: “Structure of a yebc family protein (CBU_1566) from coxiella burnetii”. X-ray diffraction, 1 ligand (SO4), 1 pocket (best druggability 0.41). MolNFT v1 #91116 on GenesisL1: 3D structure…

PDB: 4F3Q
Type: protein
Length: 234 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Transcriptional regulatory protein CBU_1566
UniProt: Q83BE4
Ligands: SO4
Pockets: 1 · best druggability 0.41

Structure

x-ray diffraction · 1 distinct chain · 51% helix, 23% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Transcriptional regulatory protein CBU_1566	protein	234	51% helix, 23% strand	Q83BE4

Ligands and binding sites

SO4 · Sulfate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	137	0.41	0.75	24	empty

Modifications

Observed in the structure: 6 modified (engineered).

Compared structures

4F3Q · Structure of a YebC family protein (CBU_1566) from Coxiella burnetii · the same entry in another collection · chain A against A, TM-score 1.00
Q83BE4 · AlphaFold monomer V2.0 prediction for probable transcriptional regulatory protein… · a predicted model of the same protein · chain A against A, TM-score 0.79

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q83BE4
Elsewhere: RCSB PDB 4F3Q · PDBe 4F3Q · UniProt Q83BE4

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