MolNFT v1 · #91109 · protein
Crystal structure of trimeric GC1Q domain of human C1QTNF5 associated with late-onset retinal macular degeneration
4F3J · Complement C1Q tumor necrosis factor-related protein 5: “Crystal structure of trimeric GC1Q domain of human C1QTNF5 associated with late-onset retinal macular…”. X-ray diffraction, 1 pocket (best druggability 0.37). MolNFT v1 #91109…
- PDB
- 4F3J
- Type
- protein
- Length
- 143 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Complement C1Q tumor necrosis factor-related protein 5
- UniProt
- Q9BXJ0
- Pockets
- 1 · best druggability 0.37
Structure
x-ray diffraction · 1 distinct chain · 0% helix, 52% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Complement C1Q tumor necrosis factor-related protein 5 | protein | 143 | 0% helix, 52% strand | Q9BXJ0 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 59 | 0.37 | 0.79 | 17 | empty |
Compared structures
- 4F3J · Crystal Structure of Trimeric gC1q Domain of Human C1QTNF5 associated with Late-onset… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9BXJ0 · AlphaFold monomer V2.0 prediction for complement C1Q tumor necrosis factor-related… · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9BXJ0
- Elsewhere: RCSB PDB 4F3J · PDBe 4F3J · UniProt Q9BXJ0
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