MolNFT v1 · #90862 · protein
Crystal structure of D-galactose-1-dehydrogenase protein from rhizobium etli
4EW6: “Crystal structure of D-galactose-1-dehydrogenase protein from rhizobium etli”. X-ray diffraction, 2 pockets (best druggability 0.67). MolNFT v1 #90862 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4EW6
- Type
- protein
- Length
- 309 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- D-galactose-1-dehydrogenase protein
- EC
- 1.1.1.48
- UniProt
- Q2KA75
- Pockets
- 2 · best druggability 0.67
Structure
x-ray diffraction · 1 distinct chain · 35% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | D-galactose-1-dehydrogenase protein (EC 1.1.1.48) | protein | 309 | 35% helix, 28% strand | Q2KA75 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 588 | 0.67 | 0.76 | 46 | empty |
| 2 | 113 | 0.38 | 0.74 | 17 | empty |
Modifications
Observed in the structure: 5 modified (engineered).
Compared structures
- 4EW6 · Crystal structure of D-galactose-1-dehydrogenase protein from Rhizobium etli · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2KA75
- Elsewhere: RCSB PDB 4EW6 · PDBe 4EW6 · UniProt Q2KA75
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