MolNFT v1 · #90853 · protein
Crystal structure of putative phage endolysin from S. enterica
4EVX: “Crystal structure of putative phage endolysin from S. enterica”. X-ray diffraction, 1 pocket (best druggability 0.56). MolNFT v1 #90853 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4EVX
- Type
- protein
- Length
- 191 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative phage endolysin
- UniProt
- Q8ZLC6
- Pockets
- 1 · best druggability 0.56
Structure
x-ray diffraction · 2 distinct chains · 50% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative phage endolysin | protein | 97 | 48% helix, 13% strand | Q8ZLC6 |
| B | Putative phage endolysin | protein | 94 | 51% helix, 14% strand | Q8ZLC6 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 104 | 0.56 | 0.84 | 22 | empty |
Interfaces
1 interface between chains.
- A–B · 985 Ų buried · 12 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 10 modified, 2 disulfide (engineered, methylation, disulfide, oxidation).
Compared structures
- 4EVX · Crystal structure of putative phage endolysin from S. enterica · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8ZLC6
- Elsewhere: RCSB PDB 4EVX · PDBe 4EVX · UniProt Q8ZLC6
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