MolNFT v1 · #90749 · protein + DNA

Restriction endonuclease dpni in complex with target DNA

4ESJ: “Restriction endonuclease dpni in complex with target DNA”. X-ray diffraction. MolNFT v1 #90749 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4ESJ
Type: protein + DNA
Length: 523 residues
Chains: 6
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P0A460

Structure

x-ray diffraction · 5 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	246	—	P0A460
B	—	protein	241	—	P0A460
C, D	—	dna	10	—	—
E	—	dna	8	—	—
F	—	dna	8	—	—

Compared structures

4ESJ · RESTRICTION ENDONUCLEASE DpnI IN COMPLEX WITH TARGET DNA · the same entry in another collection · chain F against F, TM-score 1.00
P0A460 · AlphaFold monomer V2.0 prediction for type-2 restriction enzyme dpni (P0A460) · a predicted model of the same protein · chain B against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0A460
Elsewhere: RCSB PDB 4ESJ · PDBe 4ESJ · UniProt P0A460

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.