MolNFT v1 · #90573 · RNA

Crystal structure of fluoride riboswitch

4ENC: “Crystal structure of fluoride riboswitch”. X-ray diffraction, 3 ligands (MG, K, F), 1 pocket (best druggability 0.57). MolNFT v1 #90573 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4ENC
Type: RNA
Length: 52 nucleotides
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Fluoride riboswitch
Ligands: MG, K, F
Pockets: 1 · best druggability 0.57

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Fluoride riboswitch	rna	52	—	—

Ligands and binding sites

MG · Magnesium ion · metal · 5 copies · chains A
K · Potassium ion · metal · chains A
F · Fluoride ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	312	0.57	0.78	20	MG, F, K

Compared structures

4ENC · Crystal structure of fluoride riboswitch · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 4ENC · PDBe 4ENC

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