MolNFT v1 · #90062 · DNA
Lambda-[RU(PHEN)2(DPPZ)]2+ bound to ccggatccgg
4E7Y · 5'-D(*CP*CP*GP*GP*AP*TP*CP*CP*GP*G)-3': “Lambda-[RU(PHEN)2(DPPZ)]2+ bound to ccggatccgg”. X-ray diffraction, 2 ligands (RKP, BA). MolNFT v1 #90062 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4E7Y
- Type
- DNA
- Length
- 10 nucleotides
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 5'-D(*CP*CP*GP*GP*AP*TP*CP*CP*GP*G)-3'
- Ligands
- RKP, BA
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 5'-D(*CP*CP*GP*GP*AP*TP*CP*CP*GP*G)-3' | dna | 10 | — | — |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 4E7Y · Lambda-[Ru(phen)2(dppz)]2+ Bound to CCGGATCCGG · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 4E7Y · PDBe 4E7Y
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