MolNFT v1 · #89807 · protein

Structure of parf-amppcp, I422 form

4E09 · Plasmid partitioning protein parf: “Structure of parf-amppcp, I422 form”. X-ray diffraction, 2 ligands (ACP, SO4), 1 pocket (best druggability 0.41). MolNFT v1 #89807 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4E09
Type: protein
Length: 204 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Plasmid partitioning protein parf
UniProt: B0ZE06
Ligands: ACP, SO4
Pockets: 1 · best druggability 0.41

Structure

x-ray diffraction · 1 distinct chain · 37% helix, 16% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Plasmid partitioning protein parf	protein	204	37% helix, 16% strand	B0ZE06

Ligands and binding sites

ACP · Phosphomethylphosphonic acid adenylate ester · ligand · chains A
SO4 · Sulfate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	110	0.41	0.76	20	ACP

Compared structures

4E09 · Structure of ParF-AMPPCP, I422 form · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt B0ZE06
Elsewhere: RCSB PDB 4E09 · PDBe 4E09 · UniProt B0ZE06

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.