MolNFT v1 · #89677 · protein
Crystal structure of a putative polysaccharide deacetylase (BACOVA_03992) from bacteroides ovatus atcc 8483 at 2.01 a resolution
4DWE · Uncharacterized protein: “Crystal structure of a putative polysaccharide deacetylase (BACOVA_03992) from bacteroides ovatus atcc 8483…”. X-ray diffraction, 2 pockets (best druggability 0.82). MolNFT v1 #89677 on GenesisL1: 3D…
- PDB
- 4DWE
- Type
- protein
- Length
- 460 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein
- UniProt
- A7M1K9
- Pockets
- 2 · best druggability 0.82
Structure
x-ray diffraction · 1 distinct chain · 32% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized protein | protein | 460 | 32% helix, 23% strand | A7M1K9 |
Ligands and binding sites
- GOL · Glycerol · additive · 7 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 227 | 0.82 | 0.95 | 41 | empty |
| 2 | 136 | 0.53 | 0.81 | 23 | GOL |
Modifications
Observed in the structure: 14 modified (engineered).
Compared structures
- 4DWE · Crystal structure of a putative polysaccharide deacetylase (BACOVA_03992) from… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A7M1K9
- Elsewhere: RCSB PDB 4DWE · PDBe 4DWE · UniProt A7M1K9
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