MolNFT v1 · #89075 · protein

Crystal structure of C-met in complex with triazolopyridazine inhibitor 2

4DEG · Hepatocyte growth factor receptor: “Crystal structure of C-met in complex with triazolopyridazine inhibitor 2”. X-ray diffraction, 1 ligand (0JJ), 2 pockets (best druggability 0.62). MolNFT v1 #89075 on GenesisL1: 3D structure…

PDB: 4DEG
Type: protein
Length: 286 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hepatocyte growth factor receptor
EC: 2.7.10.1
UniProt: P08581
Ligands: 0JJ
Pockets: 2 · best druggability 0.62

Structure

x-ray diffraction · 1 distinct chain · 42% helix, 15% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Hepatocyte growth factor receptor (EC 2.7.10.1)	protein	286	42% helix, 15% strand	P08581

Ligands and binding sites

0JJ · 7-methoxy-N-{[6-(3-methyl-1,2-thiazol-5-yl)[1,2,4]triazolo[4,3-b]pyridazin-3-yl]methyl}-1,5-naphthyridin-4-amine · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	188	0.62	0.83	27	0JJ
2	258	0.57	0.77	34	empty

Compared structures

4DEG · Crystal structure of c-Met in complex with triazolopyridazine inhibitor 2 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P08581
Elsewhere: RCSB PDB 4DEG · PDBe 4DEG · UniProt P08581

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