MolNFT v1 · #88771 · protein

Outer surface protein BB0689 from borrelia burgdorferi

4D53: “Outer surface protein BB0689 from borrelia burgdorferi”. X-ray diffraction, 1 pocket (best druggability 0.57). MolNFT v1 #88771 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4D53
Type: protein
Length: 266 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: BB0689
UniProt: O51632
Pockets: 1 · best druggability 0.57

Structure

x-ray diffraction · 1 distinct chain · 42% helix, 24% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	BB0689	protein	133	42% helix, 24% strand	O51632

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	189	0.57	0.80	46	empty

Interfaces

1 interface between chains.

A–B · 578 Å² buried · 7 hydrogen bonds · protein-protein

Compared structures

4D53 · Outer surface protein BB0689 from Borrelia burgdorferi · the same entry in another collection · chain A against A, TM-score 1.00
O51632 · AlphaFold monomer V2.0 prediction for uncharacterized protein BB_0689 (O51632) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O51632
Elsewhere: RCSB PDB 4D53 · PDBe 4D53 · UniProt O51632

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