MolNFT v1 · #87359 · protein
Structural characterization using sulfur-sad of the cytoplasmic domain of burkholderia pseudomallei PILO2BP, an actin-like protein component of a type ivb R64- derivative pilus machinery.
4BYZ · Type IV pilus biosynthesis protein: “Structural characterization using sulfur-sad of the cytoplasmic domain of burkholderia pseudomallei PILO2BP…”. X-ray diffraction, 2 ligands (K, PO4), 1 pocket (best druggability 0.35). MolNFT v1…
- PDB
- 4BYZ
- Type
- protein
- Length
- 194 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Type IV pilus biosynthesis protein
- UniProt
- Q63JW5
- Ligands
- K, PO4
- Pockets
- 1 · best druggability 0.35
Structure
x-ray diffraction · 1 distinct chain · 27% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Type IV pilus biosynthesis protein | protein | 194 | 27% helix, 36% strand | Q63JW5 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 74 | 0.35 | 0.76 | 22 | empty |
Compared structures
- 4BYZ · Structural characterization using Sulfur-SAD of the cytoplasmic domain of Burkholderia… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q63JW5
- Elsewhere: RCSB PDB 4BYZ · PDBe 4BYZ · UniProt Q63JW5
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