GL1X · GenesisL1 explorer

MolNFT v1 · #87337 · protein

Three-dimensional structure of the mutant K109A of paracoccus pantotrophus pseudoazurin at pH 7.0

4BXV: “Three-dimensional structure of the mutant K109A of paracoccus pantotrophus pseudoazurin at pH 7.0”. X-ray diffraction, 2 ligands (CU, SO4). MolNFT v1 #87337 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
4BXV
Type
protein
Length
246 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Pseudoazurin
UniProt
P80401
Ligands
CU, SO4

Structure

x-ray diffraction · 1 distinct chain · 14% helix, 34% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, BPseudoazurinprotein12314% helix, 34% strandP80401

Ligands and binding sites

  • CU · Copper (II) ion · metal · 2 copies · chains A, B
  • SO4 · Sulfate ion · ion · 4 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 504 Ų buried · 9 hydrogen bonds · protein-protein

Compared structures

  • 4BXV · Three-dimensional structure of the mutant K109A of Paracoccus pantotrophus pseudoazurin… · the same entry in another collection · chain A against A, TM-score 1.00
  • P80401 · AlphaFold monomer V2.0 prediction for pseudoazurin (P80401) · a predicted model of the same protein · chain B against A, TM-score 0.98

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