MolNFT v1 · #87057 · protein

Crystal structure of bacillus subtilis dltc

4BPG · D-alanine--POLY(PHOSPHORIBITOL) ligase subunit 2: “Crystal structure of bacillus subtilis dltc”. X-ray diffraction. MolNFT v1 #87057 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4BPG
Type: protein
Length: 159 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: D-alanine--POLY(PHOSPHORIBITOL) ligase subunit 2
EC: 6.1.1.13
UniProt: P39579

Structure

x-ray diffraction · 2 distinct chains · 57% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	D-alanine--POLY(PHOSPHORIBITOL) ligase subunit 2 (EC 6.1.1.13)	protein	80	54% helix, 0% strand	P39579
B	D-alanine--POLY(PHOSPHORIBITOL) ligase subunit 2 (EC 6.1.1.13)	protein	79	59% helix, 0% strand	P39579

Interfaces

1 interface between chains.

A–B · 617 Å² buried · 11 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 modified (phosphorylation).

Compared structures

4BPG · Crystal structure of Bacillus subtilis DltC · the same entry in another collection · chain A against A, TM-score 1.00
P39579 · AlphaFold monomer V2.0 prediction for D-alanyl carrier protein (P39579) · a predicted model of the same protein · chain B against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P39579
Elsewhere: RCSB PDB 4BPG · PDBe 4BPG · UniProt P39579

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