MolNFT v1 · #86892 · protein
Crystal structure of an unusually linked dimeric variant of bet V 1 (B)
4BKD · Major pollen allergen bet V 1-a: “Crystal structure of an unusually linked dimeric variant of bet V 1 (B)”. X-ray diffraction, 1 pocket (best druggability 0.81). MolNFT v1 #86892 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 4BKD
- Type
- protein
- Length
- 159 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Major pollen allergen bet V 1-a
- UniProt
- P15494
- Pockets
- 1 · best druggability 0.81
Structure
x-ray diffraction · 1 distinct chain · 26% helix, 40% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Major pollen allergen bet V 1-a | protein | 159 | 26% helix, 40% strand | P15494 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 409 | 0.81 | 0.89 | 48 | empty |
Modifications
Observed in the structure: 1 modified (nonstandard).
Compared structures
- 4BKD · Crystal Structure of an unusually linked dimeric variant of Bet v 1 (b) · the same entry in another collection · chain A against A, TM-score 1.00
- P15494 · AlphaFold monomer V2.0 prediction for major pollen allergen bet V 1-a (P15494) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P15494
- Elsewhere: RCSB PDB 4BKD · PDBe 4BKD · UniProt P15494
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