MolNFT v1 · #8574 · protein

Domain G2 of mouse nidogen-1

1H4U: “Domain G2 of mouse nidogen-1”. X-ray diffraction, 1 pocket (best druggability 0.37). MolNFT v1 #8574 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1H4U
Type: protein
Length: 245 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Nidogen-1
UniProt: P10493
Pockets: 1 · best druggability 0.37

Structure

x-ray diffraction · 1 distinct chain · 7% helix, 55% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Nidogen-1	protein	245	7% helix, 55% strand	P10493

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	98	0.37	0.75	15	empty

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

1H4U · Domain G2 of mouse nidogen-1 · the same entry in another collection · chain A against A, TM-score 1.00
P10493 · AlphaFold monomer V2.0 prediction for nidogen-1 (P10493) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P10493
Elsewhere: RCSB PDB 1H4U · PDBe 1H4U · UniProt P10493

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