MolNFT v1 · #84986 · RNA
Structure of an RNA duplex R(GGGCGCUCC)2 with non-adjacent G.U base pairs
438D · RNA (5'-R(*GP*GP*GP*CP*GP*CP*UP*CP*C)-3'): “Structure of an RNA duplex R(GGGCGCUCC)2 with non-adjacent G.U base pairs”. X-ray diffraction. MolNFT v1 #84986 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 438D
- Type
- RNA
- Length
- 16 nucleotides
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA (5'-R(*GP*GP*GP*CP*GP*CP*UP*CP*C)-3')
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | RNA (5'-R(*GP*GP*GP*CP*GP*CP*UP*CP*C)-3') | rna | 8 | — | — |
Interfaces
1 interface between chains.
- A–B · 398 Ų buried · 37 hydrogen bonds · nucleic-nucleic
Compared structures
- 438D · Structure of an RNA duplex R(GGGCGCUCC)2 with non-adjacent G.U base pairs · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 438D · PDBe 438D
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