MolNFT v1 · #84978 · RNA
Structure of SARCIN/RICIN loop from rat 28S rRNA
430D · SARCIN/RICIN loop from rat 28S R-RNA: “Structure of SARCIN/RICIN loop from rat 28S rRNA”. X-ray diffraction, 1 ligand (MG). MolNFT v1 #84978 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 430D
- Type
- RNA
- Length
- 29 nucleotides
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- SARCIN/RICIN loop from rat 28S R-RNA
- Ligands
- MG
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | SARCIN/RICIN loop from rat 28S R-RNA | rna | 29 | — | — |
Ligands and binding sites
- MG · Magnesium ion · metal · 9 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 modified (nucleotide modification).
Compared structures
- 430D · Structure of SARCIN/RICIN loop from rat 28S rRNA · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 430D · PDBe 430D
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