MolNFT v1 · #84796 · protein + DNA
Crystal structure of VAPBC2 from rickettsia felis bound to a DNA fragment from their promoter
3ZVK: “Crystal structure of VAPBC2 from rickettsia felis bound to a DNA fragment from their promoter”. X-ray diffraction. MolNFT v1 #84796 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3ZVK
- Type
- protein + DNA
- Length
- 852 residues
- Chains
- 10
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q4UNB2, Q4UNB3
Structure
x-ray diffraction · 9 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 134 | — | Q4UNB2 |
| B | — | protein | 133 | — | Q4UNB2 |
| C, D | — | protein | 132 | — | Q4UNB2 |
| E | — | protein | 57 | — | Q4UNB3 |
| F | — | protein | 78 | — | Q4UNB3 |
| G | — | protein | 77 | — | Q4UNB3 |
| H | — | protein | 57 | — | Q4UNB3 |
| X | — | dna | 26 | — | — |
| Y | — | dna | 26 | — | — |
Compared structures
- 3ZVK · Crystal structure of VapBC2 from Rickettsia felis bound to a DNA fragment from their… · the same entry in another collection · chain Y against Y, TM-score 1.00
- Q4UNB2 · AlphaFold monomer V2.0 prediction for ribonuclease VAPC2 (Q4UNB2) · a predicted model of the same protein · chain B against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4UNB2
- Every structure of UniProt Q4UNB3
- Elsewhere: RCSB PDB 3ZVK · PDBe 3ZVK · UniProt Q4UNB2 · UniProt Q4UNB3
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