MolNFT v1 · #84033 · protein

Crystal structure of pirb

3X0U · Uncharacterized protein: “Crystal structure of pirb”. X-ray diffraction, 14 pockets (best druggability 0.87). MolNFT v1 #84033 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3X0U
Type: protein
Length: 846 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Uncharacterized protein
UniProt: X7RH70
Pockets: 14 · best druggability 0.87

Structure

x-ray diffraction · 2 distinct chains · 46% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Uncharacterized protein	protein	425	46% helix, 21% strand	X7RH70
B	Uncharacterized protein	protein	421	46% helix, 20% strand	X7RH70

Pockets

14 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	721	0.87	0.90	57	empty
2	51	0.64	0.95	17	empty
3	283	0.59	0.78	39	empty
4	216	0.57	0.79	28	empty
5	200	0.51	0.77	31	empty

Interfaces

1 interface between chains.

A–B · 1626 Å² buried · 24 hydrogen bonds · protein-protein

Compared structures

3X0U · Crystal structure of PirB · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt X7RH70
Elsewhere: RCSB PDB 3X0U · PDBe 3X0U · UniProt X7RH70

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