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MolNFT v1 · #83575 · protein

The structure of an anti-cancer lectin mytilec apo-form from the mussel mytilus galloprovincialis

3WMU: “The structure of an anti-cancer lectin mytilec apo-form from the mussel mytilus galloprovincialis”. X-ray diffraction. MolNFT v1 #83575 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
3WMU
Type
protein
Length
304 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Lectin
UniProt
B3EWR1

Structure

x-ray diffraction · 2 distinct chains · 6% helix, 43% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ALectinprotein1516% helix, 43% strandB3EWR1
BLectinprotein1536% helix, 43% strandB3EWR1

Ligands and binding sites

  • GOL · Glycerol · additive · 6 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 742 Ų buried · 11 hydrogen bonds · protein-protein

Compared structures

  • 3WMU · The structure of an anti-cancer lectin mytilec apo-form from the mussel Mytilus… · the same entry in another collection · chain A against A, TM-score 1.00
  • B3EWR1 · AlphaFold monomer V2.0 prediction for lectin (B3EWR1) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

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