MolNFT v1 · #83472 · protein

Crystal structure of mutant nitrobindin F44W/M75L/H76L/Q96C/M148L/H158L (NB5) from arabidopsis thaliana

3WJD · UPF0678 fatty acid-binding protein-like protein AT1G79260: “Crystal structure of mutant nitrobindin F44W/M75L/H76L/Q96C/M148L/H158L (NB5) from arabidopsis thaliana”. X-ray diffraction, 1 pocket (best druggability 0.65). MolNFT v1…

PDB: 3WJD
Type: protein
Length: 153 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: UPF0678 fatty acid-binding protein-like protein AT1G79260
UniProt: O64527
Pockets: 1 · best druggability 0.65

Structure

x-ray diffraction · 1 distinct chain · 4% helix, 66% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	UPF0678 fatty acid-binding protein-like protein AT1G79260	protein	153	4% helix, 66% strand	O64527

Ligands and binding sites

GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	259	0.65	0.82	30	empty

Compared structures

3WJD · Crystal structure of mutant nitrobindin F44W/M75L/H76L/Q96C/M148L/H158L (NB5) from… · the same entry in another collection · chain A against A, TM-score 1.00
O64527 · AlphaFold monomer V2.0 prediction for UPF0678 fatty acid-binding protein-like protein… · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O64527
Elsewhere: RCSB PDB 3WJD · PDBe 3WJD · UniProt O64527

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.