MolNFT v1 · #82994 · protein

Crystal structure of rsbx in complex with manganese in space group P21

3W43 · Phosphoserine phosphatase rsbx: “Crystal structure of rsbx in complex with manganese in space group P21”. X-ray diffraction, 1 ligand (MN), 2 pockets (best druggability 0.40). MolNFT v1 #82994 on GenesisL1: 3D structure, binding…

PDB: 3W43
Type: protein
Length: 199 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Phosphoserine phosphatase rsbx
EC: 3.1.3.3
UniProt: P17906
Ligands: MN
Pockets: 2 · best druggability 0.40

Structure

x-ray diffraction · 1 distinct chain · 23% helix, 36% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Phosphoserine phosphatase rsbx (EC 3.1.3.3)	protein	199	23% helix, 36% strand	P17906

Ligands and binding sites

MN · Manganese (II) ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	52	0.40	0.82	14	empty
2	55	0.32	0.77	16	empty

Compared structures

3W43 · Crystal structure of RsbX in complex with manganese in space group P21 · the same entry in another collection · chain A against A, TM-score 1.00
P17906 · AlphaFold monomer V2.0 prediction for phosphoserine phosphatase rsbx (P17906) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P17906
Elsewhere: RCSB PDB 3W43 · PDBe 3W43 · UniProt P17906

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