MolNFT v1 · #82657 · protein
HIV fusion inhibitor mt-C34
3VTP · Transmembrane protein GP41: “HIV fusion inhibitor mt-C34”. X-ray diffraction, 2 ligands (ACE, NH2). MolNFT v1 #82657 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3VTP
- Type
- protein
- Length
- 68 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Transmembrane protein GP41
- UniProt
- P03377
- Ligands
- ACE, NH2
Structure
x-ray diffraction · 2 distinct chains · 91% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| C | Transmembrane protein GP41 | protein | 41 | 95% helix, 0% strand | P03377 |
| D | Transmembrane protein GP41 | protein | 27 | 85% helix, 0% strand | P03377 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- C–D · 460 Ų buried · 3 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 covalent (covalent ligand).
Compared structures
- 3VTP · HIV fusion inhibitor MT-C34 · the same entry in another collection · chain C against C, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03377
- Elsewhere: RCSB PDB 3VTP · PDBe 3VTP · UniProt P03377
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.