MolNFT v1 · #82550 · protein
Small heat shock protein HSP14.0 of C-terminal deletion variant
3VQL · Small heat shock protein STHSP14.0: “Small heat shock protein HSP14.0 of C-terminal deletion variant”. X-ray diffraction, 4 pockets (best druggability 0.31). MolNFT v1 #82550 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 3VQL
- Type
- protein
- Length
- 219 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Small heat shock protein STHSP14.0
- UniProt
- Q970D9
- Pockets
- 4 · best druggability 0.31
Structure
x-ray diffraction · 2 distinct chains · 13% helix, 46% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Small heat shock protein STHSP14.0 | protein | 106 | 12% helix, 47% strand | Q970D9 |
| B | Small heat shock protein STHSP14.0 | protein | 113 | 14% helix, 45% strand | Q970D9 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 86 | 0.31 | 0.73 | 17 | empty |
| 2 | 58 | 0.29 | 0.74 | 12 | empty |
| 3 | 66 | 0.29 | 0.73 | 17 | empty |
| 4 | 67 | 0.28 | 0.73 | 15 | empty |
Interfaces
1 interface between chains.
- A–B · 1786 Ų buried · 44 hydrogen bonds · protein-protein
Compared structures
- 3VQL · Small heat shock protein hsp14.0 of C-terminal deletion variant · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q970D9
- Elsewhere: RCSB PDB 3VQL · PDBe 3VQL · UniProt Q970D9
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