MolNFT v1 · #82477 · protein

Cellobiohydrolase mutant, CCCEL6C D102A, in the closed form

3VOF: “Cellobiohydrolase mutant, CCCEL6C D102A, in the closed form”. X-ray diffraction, 1 ligand (BGC), 2 pockets (best druggability 0.72). MolNFT v1 #82477 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3VOF
Type: protein
Length: 372 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cellobiohydrolase
EC: 3.2.1.91
UniProt: B7X9Z2
Ligands: BGC
Pockets: 2 · best druggability 0.72

Structure

x-ray diffraction · 1 distinct chain · 41% helix, 11% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cellobiohydrolase (EC 3.2.1.91)	protein	372	41% helix, 11% strand	B7X9Z2

Ligands and binding sites

BGC · beta-D-glucopyranose · sugar · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	450	0.72	0.82	55	BGC
2	60	0.33	0.76	13	empty

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

3VOF · Cellobiohydrolase mutant, CcCel6C D102A, in the closed form · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt B7X9Z2
Elsewhere: RCSB PDB 3VOF · PDBe 3VOF · UniProt B7X9Z2

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