MolNFT v1 · #81923 · protein + RNA
Crystal structure of puf-6 in complex with 5BE13 RNA
3V71 · Puf (PUMILIO/FBF) domain-containing protein 7, confirmed by…: “Crystal structure of puf-6 in complex with 5BE13 RNA”. X-ray diffraction. MolNFT v1 #81923 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3V71
- Type
- protein + RNA
- Length
- 371 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Puf (PUMILIO/FBF) domain-containing protein 7, confirmed by transcript evidence; RNA…
- UniProt
- O44169
Structure
x-ray diffraction · 2 distinct chains · 70% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Puf (PUMILIO/FBF) domain-containing protein 7, confirmed by transcript evidence | protein | 364 | 70% helix, 0% strand | O44169 |
| B | RNA (5'-R(*CP*UP*CP*UP*GP*UP*AP*UP*CP*UP*UP*GP*U)-3') | rna | 7 | — | — |
Ligands and binding sites
- EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid · additive · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 993 Ų buried · 36 hydrogen bonds · protein-nucleic
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O44169
- Elsewhere: RCSB PDB 3V71 · PDBe 3V71 · UniProt O44169
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