MolNFT v1 · #81898 · protein
Crystal structure of pyrococcus furiosus PF2050, a member of DUF2666 family protein
3V68 · Putative uncharacterized protein: “Crystal structure of pyrococcus furiosus PF2050, a member of DUF2666 family protein”. X-ray diffraction, 1 pocket (best druggability 0.44). MolNFT v1 #81898 on GenesisL1: 3D structure, binding…
- PDB
- 3V68
- Type
- protein
- Length
- 248 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative uncharacterized protein
- UniProt
- Q8TZE5
- Pockets
- 1 · best druggability 0.44
Structure
x-ray diffraction · 1 distinct chain · 50% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative uncharacterized protein | protein | 248 | 50% helix, 13% strand | Q8TZE5 |
Ligands and binding sites
- MPD · (4S)-2-methyl-2,4-pentanediol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 153 | 0.44 | 0.75 | 22 | MPD |
Compared structures
- 3V68 · Crystal structure of Pyrococcus furiosus PF2050, a member of DUF2666 family protein · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8TZE5
- Elsewhere: RCSB PDB 3V68 · PDBe 3V68 · UniProt Q8TZE5
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