MolNFT v1 · #81861 · protein

Human MALT1 (334-719) in its ligand free form

3V55 · Mucosa-associated lymphoid tissue lymphoma translocation…: “Human MALT1 (334-719) in its ligand free form”. X-ray diffraction, 2 pockets (best druggability 0.35). MolNFT v1 #81861 on GenesisL1: 3D structure, binding sites and…

PDB: 3V55
Type: protein
Length: 368 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Mucosa-associated lymphoid tissue lymphoma translocation protein 1
EC: 3.4.22.-
UniProt: Q9UDY8
Pockets: 2 · best druggability 0.35

Structure

x-ray diffraction · 1 distinct chain · 24% helix, 32% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (EC 3.4.22.-)	protein	368	24% helix, 32% strand	Q9UDY8

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	50	0.35	0.79	16	empty
2	84	0.34	0.75	20	empty

Compared structures

3V55 · Human MALT1 (334-719) in its ligand free form · the same entry in another collection · chain A against A, TM-score 1.00
Q9UDY8 · AlphaFold monomer V2.0 prediction for mucosa-associated lymphoid tissue lymphoma… · a predicted model of the same protein · chain A against A, TM-score 0.93

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9UDY8
Elsewhere: RCSB PDB 3V55 · PDBe 3V55 · UniProt Q9UDY8

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