MolNFT v1 · #8157 · protein
A reassessment of the madcam-1 structure and its role in integrin recognition.
1GSM · Mucosal addressin cell adhesion molecule-1: “A reassessment of the madcam-1 structure and its role in integrin recognition.”. X-ray diffraction, 1 pocket (best druggability 0.30). MolNFT v1 #8157 on GenesisL1: 3D structure, binding…
- PDB
- 1GSM
- Type
- protein
- Length
- 206 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Mucosal addressin cell adhesion molecule-1
- UniProt
- Q13477
- Pockets
- 1 · best druggability 0.30
Structure
x-ray diffraction · 1 distinct chain · 1% helix, 55% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Mucosal addressin cell adhesion molecule-1 | protein | 206 | 1% helix, 55% strand | Q13477 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 64 | 0.30 | 0.75 | 17 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Compared structures
- 1GSM · A reassessment of the MAdCAM-1 structure and its role in integrin recognition. · the same entry in another collection · chain A against A, TM-score 1.00
- Q13477 · AlphaFold monomer V2.0 prediction for mucosal addressin cell adhesion molecule 1 (Q13477) · a predicted model of the same protein · chain A against A, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q13477
- Elsewhere: RCSB PDB 1GSM · PDBe 1GSM · UniProt Q13477
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