MolNFT v1 · #81374 · protein

The structure of the sugar-binding protein male from the phytopathogen xanthomonas citri

3UOR · ABC transporter sugar binding protein: “The structure of the sugar-binding protein male from the phytopathogen xanthomonas citri”. X-ray diffraction, 8 pockets (best druggability 0.73). MolNFT v1 #81374 on GenesisL1: 3D structure…

PDB: 3UOR
Type: protein
Length: 792 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: ABC transporter sugar binding protein
UniProt: Q8PK66
Pockets: 8 · best druggability 0.73

Structure

x-ray diffraction · 2 distinct chains · 48% helix, 18% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	ABC transporter sugar binding protein	protein	397	48% helix, 18% strand	Q8PK66
B	ABC transporter sugar binding protein	protein	395	48% helix, 18% strand	Q8PK66

Pockets

8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1152	0.73	0.76	115	empty
2	281	0.60	0.79	30	empty
3	81	0.35	0.76	16	empty
4	53	0.32	0.77	16	empty
5	59	0.30	0.75	19	empty

Interfaces

1 interface between chains.

A–B · 680 Å² buried · 8 hydrogen bonds · protein-protein

Compared structures

3UOR · The structure of the sugar-binding protein MalE from the phytopathogen Xanthomonas citri · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8PK66
Elsewhere: RCSB PDB 3UOR · PDBe 3UOR · UniProt Q8PK66

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