MolNFT v1 · #81148 · protein

Hbi (R104K) deoxy

3UHY · Globin-1: “Hbi (R104K) deoxy”. X-ray diffraction, 1 ligand (HEM), 1 pocket (best druggability 0.87). MolNFT v1 #81148 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3UHY
Type: protein
Length: 291 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Globin-1
UniProt: P02213
Ligands: HEM
Pockets: 1 · best druggability 0.87

Structure

x-ray diffraction · 2 distinct chains · 82% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Globin-1	protein	146	82% helix, 0% strand	P02213
B	Globin-1	protein	145	83% helix, 0% strand	P02213

Ligands and binding sites

HEM · Protoporphyrin IX containing Fe · ligand · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	951	0.87	0.88	68	HEM

Interfaces

1 interface between chains.

A–B · 1012 Å² buried · 13 hydrogen bonds · protein-protein

Compared structures

3UHY · HBI (R104K) deoxy · the same entry in another collection · chain A against A, TM-score 1.00
P02213 · AlphaFold monomer V2.0 prediction for globin-1 (P02213) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P02213
Elsewhere: RCSB PDB 3UHY · PDBe 3UHY · UniProt P02213

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.