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MolNFT v1 · #81060 · protein

Structural and functional characterization of an anesthetic binding site in the second cysteine-rich domain of protein kinase cdelta

3UFF · Protein kinase C delta type: “Structural and functional characterization of an anesthetic binding site in the second cysteine-rich domain…”. X-ray diffraction, 2 ligands (ZN, PO4). MolNFT v1 #81060 on GenesisL1: 3D structure…

PDB
3UFF
Type
protein
Length
130 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Protein kinase C delta type
EC
2.7.11.13
UniProt
P28867
Ligands
ZN, PO4

Structure

x-ray diffraction · 1 distinct chain · 6% helix, 34% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, BProtein kinase C delta type (EC 2.7.11.13)protein656% helix, 34% strandP28867

Ligands and binding sites

  • ZN · Zinc ion · metal · 4 copies · chains A, B
  • PO4 · Phosphate ion · ion · 6 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 461 Ų buried · 13 hydrogen bonds · protein-protein

Compared structures

  • 3UFF · Structural and functional characterization of an anesthetic binding site in the second… · the same entry in another collection · chain A against A, TM-score 1.00
  • P28867 · AlphaFold monomer V2.0 prediction for protein kinase C delta type (P28867) · a predicted model of the same protein · chain A against A, TM-score 0.77

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