MolNFT v1 · #80328 · protein
Crystal structure of putative aminomethyltransferase from leptospirillum rubarum
3TTG: “Crystal structure of putative aminomethyltransferase from leptospirillum rubarum”. X-ray diffraction, 1 ligand (CL), 1 pocket (best druggability 0.62). MolNFT v1 #80328 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3TTG
- Type
- protein
- Length
- 337 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative aminomethyltransferase
- UniProt
- A3EQP6
- Ligands
- CL
- Pockets
- 1 · best druggability 0.62
Structure
x-ray diffraction · 1 distinct chain · 25% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative aminomethyltransferase | protein | 337 | 25% helix, 30% strand | A3EQP6 |
Ligands and binding sites
- CL · Chloride ion · ion · 4 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 228 | 0.62 | 0.81 | 28 | empty |
Modifications
Observed in the structure: 4 modified (engineered).
Compared structures
- 3TTG · Crystal structure of putative aminomethyltransferase from Leptospirillum rubarum · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A3EQP6
- Elsewhere: RCSB PDB 3TTG · PDBe 3TTG · UniProt A3EQP6
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