MolNFT v1 · #80279 · protein

Crystal structure of racemic villin headpiece subdomain in space group I-4C2

3TRY · D-villin-1: “Crystal structure of racemic villin headpiece subdomain in space group I-4C2”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #80279 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3TRY
Type: protein
Length: 34 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: D-villin-1
UniProt: P02640
Ligands: SO4

Structure

x-ray diffraction · 1 distinct chain · 71% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	D-villin-1	protein	34	71% helix, 0% strand	P02640

Ligands and binding sites

SO4 · Sulfate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 32 d-amino (D-amino acid).

Compared structures

3TRY · Crystal structure of racemic villin headpiece subdomain in space group I-4c2 · the same entry in another collection · chain A against A, TM-score 1.00
P02640 · AlphaFold monomer V2.0 prediction for villin-1 (P02640) · a predicted model of the same protein · chain A against A, TM-score 0.30

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P02640
Elsewhere: RCSB PDB 3TRY · PDBe 3TRY · UniProt P02640

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