MolNFT v1 · #79638 · protein
Crystal structure of lsrb from yersinia pestis complexed with autoinducer-2
3T95 · Autoinducer 2-binding protein lsrb: “Crystal structure of lsrb from yersinia pestis complexed with autoinducer-2”. X-ray diffraction, 1 ligand (PAV). MolNFT v1 #79638 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3T95
- Type
- protein
- Length
- 314 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Autoinducer 2-binding protein lsrb
- UniProt
- Q74PW2
- Ligands
- PAV
Structure
x-ray diffraction · 1 distinct chain · 43% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Autoinducer 2-binding protein lsrb | protein | 314 | 43% helix, 21% strand | Q74PW2 |
Ligands and binding sites
- PAV · (2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 3T95 · Crystal structure of LsrB from Yersinia pestis complexed with autoinducer-2 · the same entry in another collection · chain A against A, TM-score 1.00
- Q74PW2 · AlphaFold monomer V2.0 prediction for autoinducer 2-binding protein lsrb (Q74PW2) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q74PW2
- Elsewhere: RCSB PDB 3T95 · PDBe 3T95 · UniProt Q74PW2
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