MolNFT v1 · #78919 · protein
Crystal structure of symfoil-4T permutation #1: de novo designed beta- trefoil architecture with symmetric primary structure
3SNV · Symfoil-4T/PERMUTATION #1 synthetic protein: “Crystal structure of symfoil-4T permutation #1: de novo designed beta- trefoil architecture with symmetric…”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #78919 on GenesisL1: 3D…
- PDB
- 3SNV
- Type
- protein
- Length
- 249 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Symfoil-4T/PERMUTATION #1 synthetic protein
- Ligands
- SO4
Structure
x-ray diffraction · 2 distinct chains · 1% helix, 50% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Symfoil-4T/PERMUTATION #1 synthetic protein | protein | 125 | 0% helix, 51% strand | — |
| B | Symfoil-4T/PERMUTATION #1 synthetic protein | protein | 124 | 2% helix, 49% strand | — |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 8 copies · chains A, B
- TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 281 Ų buried · 4 hydrogen bonds · protein-protein
Compared structures
- 3SNV · Crystal structure of Symfoil-4T Permutation #1: de novo designed beta-trefoil… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 3SNV · PDBe 3SNV
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